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Volume 40, Number 2, 2001
Deep computing for the life sciences
 Table of contents: arrowHTML arrowPDF arrowASCII   This article: arrowHTML arrowPDF arrowASCII arrowCopyright info
   

Mapping, modeling, and visual exploration of structure-function relationships in the heart - References
by R. L. Winslow, D. F. Scollan, J. L. Greenstein, C. K. Yung, W. Baumgartner, Jr., G. Bhanot, D. L. Gresh, and B. E. Rogowitz

Cited references and note

  1. D. Noble, S. Noble, C. Bett, Y. E. Earm, W. K. Ko, and I. K. So, “The Role of Sodium-Calcium Exchange During the Cardiac Action Potential,” Annals of the New York Academy of Sciences 639, 334–354 (1991).
  2. C. Luo and Y. Rudy, “A Model of the Ventricular Cardiac Action Potential: Depolarization, Repolarization and Their Interaction,” Circulation Research 68, No. 6, 1501–1526 (1991).
  3. C. H. Luo and Y. Rudy, “A Dynamic Model of the Cardiac Ventricular Action Potential: I. Simulations of Ionic Currents and Concentration Changes,” Circulation Research 74, No. 6, 1071–1096 (1994).
  4. R. L. Winslow, J. J. Rice, M. S. Jafri, E. Marban, and B. O'Rourke, “Mechanisms of Altered Excitation-Contraction Coupling in Canine Tachycardia-Induced Heart Failure: II. Model Studies,” Circulation Research 84, No. 5, 571–586 (1999).
  5. R. E. Williams, D. A. Kass, Y. Kawagoe, P. Pak, R. S. Tunin, R. Shah, A. Hwang, and A. M. Feldman, “Endomyocardial Gene Expression During Development of Pacing Tachycardia-Induced Heart Failure in the Dog,” Circulation Research 75, No. 4, 615–623 (1994).
  6. P. H. Pak, R. E. Williams, G. F. Tomaselli, S. Kaab, and D. A. Kass, “Canine Tachycardia-Induced Heart Failure: A Model for Sudden Death in Dilated Cardiomyopathy,” Circulation 90, I–518 (abstract), (1994).
  7. A. L. Hodgkin and A. F. Huxley, “A Quantitative Description of Membrane Current and Its Application to Conduction and Excitation in Nerve,” The Journal of Physiology 117, 500–544 (1952).
  8. B. Hille, Ionic Channels of Excitable Membranes, Second Edition, Sinauer Associates, Inc., Sunderland, MA (1992), pp. 341–345.
  9. R. L. Winslow, D. F. Scollan, A. Holmes, C. K. Yung, J. Zhang, and M. S. Jafri, “Electrophysiological Modeling of Cardiac Ventricular Function: From Cell to Organ,” Annual Reviews in Biomedical Engineering 2, 119–155 (2000).
  10. S. Jafri, J. J. Rice, and R. L. Winslow, “Cardiac Ca2+ Dynamics: The Roles of Ryanodine Receptor Adaptation and Sarcoplasmic Reticulum Load,” Biophysical Journal 74, 1149–1168 (1998).
  11. M. Kubicek and M. Marek, Computational Methods in Bifurcation Theory and Dissipative Structures, Springer-Verlag, New York (1983).
  12. P. Brown, G. Byrne, and A. Hindmarsh, “VODE: A Variable-Coefficient ODE Solver,” SIAM Journal on Scientific Computation 10, 1038–1057 (1989).
  13. T. D. Williams, K. P. Walsh, R. Canepa-Anson, M. I. Noble, A. J. Drake-Holland, R. Sutton, and S. L. Lightman, “Atrial Natriuretic Peptide Response to Rapid Atrial Pacing in Cardiac-Denervated Dogs,” American Journal of Physiology 257, R162–R167 (1989).
  14. S. Kääb, H. B. Nuss, N. Chiamvimonvat, B. O'Rourke, P. H. Pak, D. A. Kass, E. Marban, and G. F. Tomaselli, “Ionic Mechanism of Action Potential Prolongation in Ventricular Myocytes from Dogs with Pacing-Induced Heart Failure,” Circulation Research 78, No. 2, 262–273 (1996).
  15. S. Kääb, J. Dixon, J. Duc, D. Ashen, M. Näbauer, D. J. Beuckelmann, D. Steinbeck, D. McKinnon, and G. F. Tomaselli, “Molecular Basis of Transient Outward Potassium Current Down Regulation in Human Heart Failure: A Decrease in Kv4.3 mRNA Correlates with a Reduction in Current Density,” Circulation 98, No. 14, 1383–1393 (1998).
  16. S.-i. Koumi, C. L. Backer, and C. E. Arentzen, “Characterization of Inwardly Rectifying K+ Channel in Human Cardiac Myocytes: Alterations in Channel Behavior in Myocytes Isolated from Patients with Idiopathic Dilated Cardiomyopathy,” Circulation 92, No. 2, 164–174 (1995).
  17. D. J. Beuckelmann, M. Nabauer, and E. Erdmann, “Alterations of K+ Currents in Isolated Human Ventricular Myocytes from Patients with Terminal Heart Failure,” Circulation Research 73, No. 2, 379–385 (1993).
  18. B. O'Rourke, L. F. Peng, S. Kaab, R. Tunin, G. F. Tomaselli, D. A. Kass, and E. Marban, “Mechanisms of Altered Excitation-Contraction Coupling in Canine Tachycardia-Induced Heart Failure: I. Experimental Studies,” Circulation Research 84, No. 5, 562–570 (1999).
  19. H. B. Nuss, S. Kaab, D. A. Kass, G. F. Tomaselli, and E. Marban, “Cellular Basis of Ventricular Arrhythmias and Abnormal Automaticity in Heart Failure,” American Journal of Physiology 277, H80–H91 (1999).
  20. F. P. Mall, “On the Muscular Architecture of the Ventricles of the Human Heart,” American Journal of Anatomy 11, 211–266 (1911).
  21. C. C. Fox and G. M. Hutchins, “The Architecture of the Human Ventricular Myocardium,” Johns Hopkins Medical Journal 130, 289–299 (1972).
  22. D. D. Streeter, H. M. Spotnitz, D. P. Patel, J. Ross, and E. H. Sonnenblick, “Fiber Orientation in the Canine Left Ventricle During Systole and Diastole,” Circulation Research 24, No. 3, 339–347 (1969).
  23. D. D. Streeter and W. T. Hanna, “Engineering Mechanics for Successive States in Canine Left Ventricular Myocardium: II. Fiber Angle and Sarcomere Length,” Circulation Research 33, No. 6, 656–664 (1973).
  24. P. M. F. Nielsen, I. J. LeGrice, B. H. Smaill, and P. J. Hunter, “Mathematical Model of Geometry and Fibrous Structure of the Heart,” American Journal of Physiology 260, H1365–H1378 (1991).
  25. I. J. LeGrice, P. J. Hunter, and B. H. Smaill, “Laminar Structure of the Heart: A Mathematical Model,” American Journal of Physiology 272, H2466–H2476 (1997).
  26. K. D. Costa, Y. Takayama, A. D. McCulloch, and J. W. Covell, “Laminar Fiber Architecture and Three-Dimensional Systolic Mechanics in Canine Ventricular Myocardium,” American Journal of Physiology 276, H595–H607 (1999).
  27. E. W. Hsu, A. L. Muzikant, S. A. Matulevicius, R. C. Penland, and C. S. Henriquez, “Magnetic Resonance Myocardial Fiber-Orientation Mapping with Direct Histological Correlation,” American Journal of Physiology 274, H1627–H1634 (1998).
  28. D. Scollan, A. Holmes, R. L. Winslow, and J. Forder, “Histologic Validation of Reconstructed Myocardial Microstructure from High Resolution MR Diffusion Tensor Imaging,” American Journal of Physiology 275, H2308–H2318 (1998).
  29. A. Holmes, D. Scollan, and R. Winslow, “Direct Histological Validation of Diffusion Tensor MRI in Formalin-Fixed Myocardium,” Magnetic Resonance in Medicine 44, No. 1, 157–161 (2000).
  30. D. Scollan, J. Zhang, A. Holmes, C. Yung, and R. Winslow, “Reconstruction of Cardiac Ventricular Geometry and Fiber Orientation Using GRASS and Diffusion-Tensor Magnetic Resonance Imaging,” Annals of Biomedical Engineering 28, No. 8, 934–944 (2000).
  31. J. Zhang, Reconstruction of Geometry from Cardiac MR Images, master's thesis, Department of Biomedical Engineering, The Johns Hopkins University, Baltimore, MD (1999).
  32. H. Hoppe, T. DeRose, T. DuChamp, J. McDonald, and W. Stuetzle, “Piecewise Smooth Surface Reconstruction from Unorganized Points,” Computer Graphics 26, No. 2, 71–78 (1992).
  33. A. E. Pollard, N. Hooke, and C. S. Henriquez, “Cardiac Propagation Simulation,” High Performance Computing in Biomedical Research, T. C. Pilkington, B. Loftis, J. F. Thompson, S. L.-Y. Woo, T. C. Palmer, and T. F. Budinger, Editors, CRC Press, Boca Raton, FL (1993).
  34. C. S. Henriquez, “Simulating the Electrical Behavior of Cardiac Tissue Using the Bidomain Model,” Critical Reviews in Biomedical Engineering 21, 1–77 (1993).
  35. C. S. Henriquez, A. L. Muzikant, and C. K. Smoak, “Anisotropy, Fiber Curvature, and Bath Loading Effects on Activation in Thin and Thick Cardiac Tissue Preparations: Simulations in a Three-Dimensional Bidomain Model,” Journal of Cardiovascular Electrophysiology 7, 424–444 (1996).
  36. R. L. Winslow, D. Cai, A. Varghese, and Y. C. Lai, “Generation and Propagation of Normal and Abnormal Pacemaker Activity in Network Models of Cardiac Sinus Node and Atrium,” Chaos, Solitons, and Fractals 5, Nos. 3, 4, 491–512 (1995).
  37. R. L. Winslow, D. Cai, and Y. C. Lai, “Network Models of the SA Node,” Proceedings, IFAC Symposium on Modeling and Control in Biomedical Systems, Galveston, TX (March 27–30, 1994), pp. 86–91.
  38. R. L. Winslow, A. Kimball, A. Varghese, and D. Noble, “Simulating Cardiac Sinus and Atrial Network Dynamics on the Connection Machine,” Physica D: Nonlinear Phenomena 64, 281–298 (1993).
  39. O. M. Knio, H. N. Najm, and P. S. Wyckoff, “A Semi-Implicit Numerical Scheme for Reacting Flow: II. Stiff, Operator-Split Formulation,” Journal of Computational Physics 154, 428–467 (1999).
  40. H. N. Najm, P. S. Wyckoff, and O. M. Knio, “A Semi-Implicit Numerical Scheme for Reacting Flow: I. Stiff Chemistry,” Journal of Computational Physics 143, 381–402 (1998).
  41. D. Gresh, B. E. Rogowitz, R. L. Winslow, D. F. Scollan, and C. K. Yung, “WEAVE: A System for 3-D and Statistical Visualization, Applied to Cardiac Stimulation and Measurement Data,” Proceedings, Visualization 2000, Salt Lake City, UT (October 8–13, 2000).
  42. “G proteins” represent a protein family, also referred to as “GTP-binding proteins,” where “GTP” stands for “guanosine triphosphate.”
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