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IBM Journal of Research and Development
Applications of Massively Parallel Systems   Volume 52, Number 1/2, 2008
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Scaling climate simulation applications on the IBM Blue Gene/L system - References

 by J. M. Dennis
and H. M. Tufo
References

  1. The Intergovernmental Panel on Climate Change (IPCC), “Climate Change 2007: The Physical Science Basis,” Summary for Policymakers, Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change, 2007; see http://www.aaas.org/news/press_room/climate_change/media/4th_spm2feb07.pdf.
  2. W. D. Collins, C. M. Bitz, M. L. Blackmon, G. B. Bonan, C. S. Bretherton, J. A. Carton, P. Chang, et al., “The Community Climate System Model Version 3 (CCSM3),” J. Climate 19, No. 11, 2122–2143 (2006).
  3. M. E. Maltrud and J. L. McClean, “An Eddy Resolving Global 1/10° Ocean Simulation,” Ocean Modeling 8, No. 1-2, 31–54 (2005).
  4. G. Almasi, G. Bhanot, D. Chen, M. Eleftheriou, B. Fitch, A. Gara, R. Germain, et al., “Early Experience with Scientific Applications on the Blue Gene/L Supercomputer,” Euro-Par 2005 Parallel Processing, Vol. 3648, 2005, pp. 560–570; see http://www.springerlink.com/content/7xl8hhbhbacp0vav/fulltext.pdf.
  5. J. M. Dennis, “Partitioning with Space-Filling Curves on the Cubed-Sphere,” Proceedings of the 17th International Symposium on Parallel and Distributed Processing, 2003.
  6. J. M. Dennis, “Inverse Space-Filling Curve Partitioning of a Global Ocean Model,” IEEE International Parallel and Distributed Processing Symposium, 2007, pp. 1–10; see http://www.cecs.uci.edu/~papers/ipdps07/pdfs/IPDPS-1569010963-paper-2.pdf.
  7. R. D. Loft, S. J. Thomas, and J. M. Dennis, “Terascale Spectral Element Dynamical Core for Atmospheric General Circulation Models,” Proceedings of the 2001 ACM/IEEE Conference on Supercomputing, 2001; see http://delivery.acm.org/10.1145/590000/582052/p18-loft.pdf?key1=582052&key2=0356663911&coll=GUIDE&dl=GUIDE&CFID=4568951&
    CFTOKEN=48073844    .
  8. R. D. Nair, S. J. Thomas, and R. D. Loft, “A Discontinuous Galerkin Transport Scheme on the Cubed Sphere,” Monthly Weather Review 133, 814–828 (2005).
  9. J. M. Dennis, R. D. Nair, H. M. Tufo, M. Levy, and T. Voran, “Development of a Scalable Global Discontinuous Galerkin Atmospheric Model,” 2006; see http://www.csc.cs.colorado.edu/~tufo/pubs/tufo-2005-ijcse.pdf.
  10. P. W. Jones, P. H. Worley, Y. Yoshida, J. B. White III, and J. Levesque, “Practical Performance Portability in the Parallel Ocean Program (POP): Research Articles,” Concurr. Comput. Pract. Exper. 17, No. 10, 1317–1327 (2005).
  11. I. T. Foster and B. R. Toonen, “Load-Balancing Algorithms for Climate Models,” Proceedings of the Scalable High-Performance Computing Conference, 1994, pp. 674–681.
  12. S. P. Muszala, G. Alaghband, D. A. Connors, and J. J. Hack, “A VFSA Scheduler for Radiative Transfer Data in Climate Models,” Proceedings of the 17th International Conference on Parallel and Distributed Computing, 2004; see http://ece.colorado.edu/~muszala/pubs/54.pdf.
  13. S. P. Muszala, J. J. Hack, D. A. Connors, and G. Alaghband, “The Promise of Load-Balancing the Parameterization of Moist Convection Using a Model Data Load Index.”, J. Atmos. Oceanic Technol. Am. Meteorol. Soc. 23, No. 4, 525–537 (2006).
  14. H. Sagan, Space-Filling Curves, Springer-Verlag, New York, 1994.
  15. J. Li, W.-K. Liao, A. Choudhary, R. Ross, R. Thakur, W. Gropp, R. Latham, A. Siegel, B. Gallagher, and M. Zingale, “Parallel netCDF: A High-Performance Scientific I/O Interface,” Proceedings of the 2003 ACM/IEEE Conference on Supercomputing, 2003.
  16. J. Larson, R. Jacob, and E. Ong, “The Model Coupling Toolkit: A New Fortran90 Toolkit for Building Multiphysics Parallel Coupled Models,” Int. J. High Perf. Comput. Appl. 19, No. 3, 277–292 (2005).
  17. R. Jacob, J. Larson, and E. Ong, “MxN Communication and Parallel Interpolation in CCSM3 Using the Model Coupling Toolkit,” Int. J. High Perf. Comput. Appl. 19, No. 3, 293–307 (2005).
  18. Blue Gene Consortium; see http://www-fp.mcs.anl.gov/bgl2/.
  19. J. M. Dennis and E. R. Jessup, “Applying Automated Memory Analysis to Improve Iterative Algorithms,” SIAM J. Sci. Comput. 29, No. 5, 2210–2223 (2007).
  20. HOMME on the IBM Blue Gene/L; see http://www.homme.ucar.edu.
  21. I. M. Held and M. J. Suarez, “A Proposal for the Intercomparison of the Dynamical Cores of Atmospheric General Circulation Models,” Bull. Am. Meteorol. Soc. 75, No. 10, 1825–1830 (1994).
  22. S. Shingu, H. Takahara, H. Fuchigami, M. Yamada, Y. Tsuda, W. Ohfuchi, Y. Sasaki, et al., “A 26.58 Tflops Global Atmospheric Simulation with the Spectral Transform Method on the Earth Simulator,” Proceedings of the ACM/IEEE Supercomputing Conference, 2002; see http://delivery.acm.org/10.1145/770000/762828/p67-shingu.pdf?key1=762828&key2=9079663911&coll=GUIDE&dl=GUIDE&CFID=4573887&
    CFTOKEN=92634490    .
  23. S. Habata, M. Yokokawa, and S. Kitawaki, “The Earth Simulator,” NEC Res. Dev. 44, No. 1, 21–26 (2003).
  24. M. J. Grote and T. Huckle, “Parallel Preconditioning with Sparse Approximate Inverses,” SIAM J. Sci. Comput. 18, No. 3, 838–853 (1997).


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